From 23010f3b03b53a4507d82ef5f5e2401d818d2965 Mon Sep 17 00:00:00 2001
From: Jason Bacon <bacon@NetBSD.org>
Date: Wed, 20 May 2020 07:39:33 -0500
Subject: [PATCH] wip/vcf2hap: import vcf2hap-0.1.1.15

vcf2hap is a simple tool for generating a .hap file from a VCF. The .hap file
is required by haplohseq.
vcf2hap is extremely fast and requires a trivial amount of memory regardless of
the size of the VCF file.
---
 vcf2hap/DESCR    |  4 ++++
 vcf2hap/Makefile | 22 ++++++++++++++++++++++
 vcf2hap/PLIST    |  2 ++
 vcf2hap/distinfo |  6 ++++++
 4 files changed, 34 insertions(+)
 create mode 100644 vcf2hap/DESCR
 create mode 100644 vcf2hap/Makefile
 create mode 100644 vcf2hap/PLIST
 create mode 100644 vcf2hap/distinfo

diff --git a/vcf2hap/DESCR b/vcf2hap/DESCR
new file mode 100644
index 0000000000..0d3f7bc3d8
--- /dev/null
+++ b/vcf2hap/DESCR
@@ -0,0 +1,4 @@
+vcf2hap is a simple tool for generating a .hap file from a VCF. The .hap file
+is required by haplohseq.
+vcf2hap is extremely fast and requires a trivial amount of memory regardless of
+the size of the VCF file.
diff --git a/vcf2hap/Makefile b/vcf2hap/Makefile
new file mode 100644
index 0000000000..ef2f88ff2c
--- /dev/null
+++ b/vcf2hap/Makefile
@@ -0,0 +1,22 @@
+# $NetBSD$
+#
+###########################################################
+#                  Generated by fbsd2pkg                  #
+#              Wed May 20 07:37:06 CDT 2020               #
+###########################################################
+
+DISTNAME=	vcf2hap-0.1.1.15
+CATEGORIES=	biology
+MASTER_SITES=	${MASTER_SITE_GITHUB:=auerlab/}
+GITHUB_TAG=	2cb78f53f8b7116972f0df2a8974f1103ff890ae
+
+MAINTAINER=	bacon@NetBSD.org
+HOMEPAGE=	https://github.com/auerlab/vcf2hap
+COMMENT=	Generate .hap file from VCF for haplohseq
+LICENSE=	2-clause-bsd
+
+pre-build:
+	(cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend)
+
+.include "../../wip/biolibc/buildlink3.mk"
+.include "../../mk/bsd.pkg.mk"
diff --git a/vcf2hap/PLIST b/vcf2hap/PLIST
new file mode 100644
index 0000000000..29345bc3d8
--- /dev/null
+++ b/vcf2hap/PLIST
@@ -0,0 +1,2 @@
+@comment $NetBSD$
+bin/vcf2hap
diff --git a/vcf2hap/distinfo b/vcf2hap/distinfo
new file mode 100644
index 0000000000..5b08ff57e4
--- /dev/null
+++ b/vcf2hap/distinfo
@@ -0,0 +1,6 @@
+$NetBSD$
+
+SHA1 (vcf2hap-0.1.1.15-2cb78f53f8b7116972f0df2a8974f1103ff890ae.tar.gz) = f1221a5dab802b3ec27a8dbf9f762e2df8367bc2
+RMD160 (vcf2hap-0.1.1.15-2cb78f53f8b7116972f0df2a8974f1103ff890ae.tar.gz) = a6e1ebb601302e3448cd6d0ed4a46bd6c7e4fdc7
+SHA512 (vcf2hap-0.1.1.15-2cb78f53f8b7116972f0df2a8974f1103ff890ae.tar.gz) = 3d3aea7b288a6dd9d9040d59b096b3b301b7bba279449d4d287820915b8553a2686436e4ea1070475ec5271e230ec2a54d0de5a08b52b33138eb4d662437a751
+Size (vcf2hap-0.1.1.15-2cb78f53f8b7116972f0df2a8974f1103ff890ae.tar.gz) = 194255 bytes