py-dnaio: Read and write FASTQ and FASTA
This commit is contained in:
parent
0ce86ca0f7
commit
af13c2158a
|
@ -0,0 +1,3 @@
|
|||
dnaio is a Python 3 library for fast parsing of FASTQ and also FASTA files. The
|
||||
code was previously part of the cutadapt tool and has been improved since it
|
||||
has been split out.
|
|
@ -0,0 +1,33 @@
|
|||
# $NetBSD$
|
||||
#
|
||||
###########################################################
|
||||
# Generated by fbsd2pkg #
|
||||
# Thu Oct 10 15:09:51 CDT 2019 #
|
||||
###########################################################
|
||||
|
||||
DISTNAME= dnaio-${PV}
|
||||
PKGNAME= ${PYPKGPREFIX}-dnaio-${PV}
|
||||
CATEGORIES= biology
|
||||
MASTER_SITES= ${MASTER_SITE_PYPI:=d/dnaio/}
|
||||
|
||||
MAINTAINER= bacon@NetBSD.org
|
||||
HOMEPAGE= https://pypi.python.org/pypi/dnaio
|
||||
COMMENT= Read and write FASTQ and FASTA
|
||||
# Check this
|
||||
LICENSE= mit
|
||||
|
||||
# Test and change if necessary.
|
||||
# MAKE_JOBS_SAFE= no
|
||||
|
||||
# Just assuming C and C++: Adjust this!
|
||||
USE_LANGUAGES= c
|
||||
|
||||
PV= 0.4
|
||||
|
||||
# Verify that we shouldn't use distutils.mk or extensions.mk instead.
|
||||
.include "../../lang/python/egg.mk"
|
||||
# Based on USES=python. Check this.
|
||||
.include "../../lang/python/application.mk"
|
||||
# CentOS doesn't have zlib in the base, so uncomment if needed.
|
||||
# .include "../../devel/zlib/buildlink3.mk"
|
||||
.include "../../mk/bsd.pkg.mk"
|
|
@ -0,0 +1,28 @@
|
|||
@comment $NetBSD$
|
||||
${PYSITELIB}/${EGG_INFODIR}/PKG-INFO
|
||||
${PYSITELIB}/${EGG_INFODIR}/SOURCES.txt
|
||||
${PYSITELIB}/${EGG_INFODIR}/dependency_links.txt
|
||||
${PYSITELIB}/${EGG_INFODIR}/requires.txt
|
||||
${PYSITELIB}/${EGG_INFODIR}/top_level.txt
|
||||
${PYSITELIB}/dnaio/__init__.py
|
||||
${PYSITELIB}/dnaio/__init__.pyo
|
||||
${PYSITELIB}/dnaio/__init__.pyc
|
||||
${PYSITELIB}/dnaio/_util.pyo
|
||||
${PYSITELIB}/dnaio/_util.pyc
|
||||
${PYSITELIB}/dnaio/_version.pyo
|
||||
${PYSITELIB}/dnaio/_version.pyc
|
||||
${PYSITELIB}/dnaio/chunks.pyo
|
||||
${PYSITELIB}/dnaio/chunks.pyc
|
||||
${PYSITELIB}/dnaio/exceptions.pyo
|
||||
${PYSITELIB}/dnaio/exceptions.pyc
|
||||
${PYSITELIB}/dnaio/readers.pyo
|
||||
${PYSITELIB}/dnaio/readers.pyc
|
||||
${PYSITELIB}/dnaio/writers.pyo
|
||||
${PYSITELIB}/dnaio/writers.pyc
|
||||
${PYSITELIB}/dnaio/_core.so
|
||||
${PYSITELIB}/dnaio/_util.py
|
||||
${PYSITELIB}/dnaio/_version.py
|
||||
${PYSITELIB}/dnaio/chunks.py
|
||||
${PYSITELIB}/dnaio/exceptions.py
|
||||
${PYSITELIB}/dnaio/readers.py
|
||||
${PYSITELIB}/dnaio/writers.py
|
|
@ -0,0 +1,6 @@
|
|||
$NetBSD$
|
||||
|
||||
SHA1 (dnaio-0.4.tar.gz) = f4073d7a3f032dbfaaf3bb05d94a68c2a6886118
|
||||
RMD160 (dnaio-0.4.tar.gz) = 5ae69f8146d86595a09714affe4d8d8cc75614a5
|
||||
SHA512 (dnaio-0.4.tar.gz) = e6491ceab5c810cfb06f807ac24cfe95f963323002344d37a17f6c60669139469c7a6ca4ddaf19dc37c3a20c7eea9bcd80c2fcfb6378ee4f1acd5540b032b084
|
||||
Size (dnaio-0.4.tar.gz) = 123137 bytes
|
Loading…
Reference in New Issue