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plink2: Patch for new interchangeable BLAS

This commit is contained in:
Jason Bacon 2019-07-26 17:57:10 -05:00
parent 577dddf91c
commit b821472645
1 changed files with 5 additions and 7 deletions
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12
plink2/Makefile
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@ -34,8 +34,7 @@ SUBST_SED.test+= -e 's|^python|${PYTHONBIN}|g'
CFLAGS+= -g -DDYNAMIC_ZLIB -I${PREFIX}/include
CXXFLAGS+= -g -DDYNAMIC_ZLIB -I${PREFIX}/include
# MAKE_FLAGS+= ZLIB=-lz BLASFLAGS64="-L${PREFIX}/lib -lopenblas"
MAKE_FLAGS+= ZLIB=-lz BLASFLAGS64="-L${PREFIX}/lib -lcblas ${BLAS_LIBS}"
MAKE_FLAGS+= ZLIB=-lz BLASFLAGS64="-L${PREFIX}/lib -lcblas ${LAPACK_LIBS} ${BLAS_LIBS}"
# Keep debug info until at least next beta
# INSTALL_TARGET= install-strip
@ -46,19 +45,18 @@ MAKE_FILE= ${FILESDIR}/Makefile.generic
DATADIR= ${PREFIX}/share/plink2
post-patch:
${SED} -e "s|%%DATADIR%%|${DATADIR}|g" ${FILESDIR}/plink2-test.in \
> ${WRKDIR}/plink2-test
post-install:
(cd ${WRKSRC} && pax -rw Tests ${DESTDIR}${DATADIR})
${CHMOD} a+x \
${DESTDIR}${DATADIR}/Tests/run_tests.sh \
${DESTDIR}${DATADIR}/Tests/*/run_tests.sh
# ${CHMOD} -R a+rX ${DESTDIR}${DATADIR}/Tests
${SED} -e "s|%%DATADIR%%|${DATADIR}|g" ${FILESDIR}/plink2-test.in \
> ${WRKDIR}/plink2-test
${INSTALL_SCRIPT} ${WRKDIR}/plink2-test ${DESTDIR}${PREFIX}/bin
${INSTALL_SCRIPT} ${FILESDIR}/plink2-bench ${DESTDIR}${PREFIX}/bin
# .include "../../wip/openblas/buildlink3.mk"
# .include "../../math/blas/buildlink3.mk"
.include "../../wip/mk/blas.buildlink3.mk"
.include "../../wip/cblas/buildlink3.mk"
.include "../../lang/python/application.mk"