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Import mpb-openmpi-1.4.2 as wip/mpb-openmpi. 

The MIT Photonic-Bands (MPB) package is a free program for computing the band
structures (dispersion relations) and electromagnetic modes of periodic
dielectric structures, on both serial and parallel computers.
This commit is contained in:
Jason Bacon 2013-06-23 18:33:44 +00:00 committed by Thomas Klausner
parent 3c6eed56e0
commit ef2a0277f4
10 changed files with 214 additions and 0 deletions
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3
mpb-openmpi/DESCR Normal file
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The MIT Photonic-Bands (MPB) package is a free program for computing the band
structures (dispersion relations) and electromagnetic modes of periodic
dielectric structures, on both serial and parallel computers.

33
mpb-openmpi/Makefile Normal file
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# $NetBSD: Makefile,v 1.1 2013/06/23 18:33:44 outpaddling Exp $
#
DISTNAME= mpb-1.4.2
PKGNAME= mpb-openmpi-1.4.2
CATEGORIES= math
MASTER_SITES= http://ab-initio.mit.edu/mpb/
MAINTAINER= jwbacon@tds.net
HOMEPAGE= http://ab-initio.mit.edu/mpb/
COMMENT= MIT Photonic Bands
LICENSE= gnu-gpl-v3
# Use HAS_CONFIGURE, not GNU_CONFIGURE, otherwise --prefix= will be overridden
HAS_CONFIGURE= yes
USE_LIBTOOL= yes
USE_LANGUAGES= c fortran77
# --prefix=${DESTDIR}... can replace patches as long as HAS_CONFIGURE is used
CONFIGURE_ARGS+=--with-libctl=${PREFIX}/share/libctl \
--with-mpi \
--prefix=${MPI_PREFIX:Q} \
--mandir=${MPI_PREFIX:Q}/man
CFLAGS+= -DH5_USE_16_API=1
.include "../../math/blas/buildlink3.mk"
.include "../../math/lapack/buildlink3.mk"
.include "../../devel/hdf5/buildlink3.mk"
.include "../../wip/fftw2-openmpi/buildlink3.mk"
.include "../../devel/readline/buildlink3.mk"
.include "../../devel/libctl/buildlink3.mk"
.include "../../mk/bsd.pkg.mk"

5
mpb-openmpi/PLIST Normal file
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@comment $NetBSD: PLIST,v 1.1 2013/06/23 18:33:44 outpaddling Exp $
openmpi/bin/mpb-mpi
openmpi/man/man1/mpb.1
openmpi/share/libctl/specs/mpb.scm
@pkgdir openmpi/lib

20
mpb-openmpi/buildlink3.mk Normal file
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# $NetBSD: buildlink3.mk,v 1.1 2013/06/23 18:33:44 outpaddling Exp $
# XXX BUILDLINK_DEPMETHOD.mpb-openmpi?= build
BUILDLINK_TREE+= mpb-openmpi
.if !defined(MPB_BUILDLINK3_MK)
MPB_BUILDLINK3_MK:=
BUILDLINK_API_DEPENDS.mpb-openmpi+= mpb-openmpi>=1.4.2
BUILDLINK_PKGSRCDIR.mpb-openmpi?= ../../jb-wip/mpb-openmpi
.include "../../math/blas/buildlink3.mk"
.include "../../math/lapack/buildlink3.mk"
.include "../../devel/hdf5/buildlink3.mk"
.include "../../math/fftw2/buildlink3.mk"
.include "../../devel/readline/buildlink3.mk"
.include "../../wip/libctl/buildlink3.mk"
.endif # MPB_BUILDLINK3_MK
BUILDLINK_TREE+= -mpb-openmpi

10
mpb-openmpi/distinfo Normal file
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$NetBSD: distinfo,v 1.1 2013/06/23 18:33:44 outpaddling Exp $
SHA1 (mpb-1.4.2.tar.gz) = 2d4052566cff6c6befd31183253a908654b534f8
RMD160 (mpb-1.4.2.tar.gz) = 6440f0e19d4b5b8354c135034429ea2031c4301d
Size (mpb-1.4.2.tar.gz) = 686488 bytes
SHA1 (patch-mpb-ctl_Makefile.in) = 822a94fe7239664002daf45d0bee94b415af15c4
SHA1 (patch-src_util_Makefile.in) = a2ed814bf1ad94d4192fa82fc1cdbcc926eb53b2
SHA1 (patch-src_util_check.c) = 59fb816d555bf7baf718253bde3bca8516da6d69
SHA1 (patch-src_util_check.h) = 278a7c27ec3d0e06c1d9611f99b1d4a5d4f3d2de
SHA1 (patch-utils_Makefile.in) = bcdc8b28a2bf29c1e94b38a9b5dd7d93073a00a6

51
mpb-openmpi/patches/patch-mpb-ctl_Makefile.in Normal file
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$NetBSD: patch-mpb-ctl_Makefile.in,v 1.1 2013/06/23 18:33:44 outpaddling Exp $
--- mpb-ctl/Makefile.in.orig 2002-09-14 22:20:55.000000000 +0000
+++ mpb-ctl/Makefile.in
@@ -66,7 +66,12 @@ LDFLAGS = $(MY_LDFLAGS) @LDFLAGS@
##############################################################################
INSTALL = @INSTALL@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
+INSTALL_DATA = @INSTALL_DATA@
prefix = @prefix@
+exec_prefix = @exec_prefix@
+bindir = @bindir@
mandir = @mandir@
# c.f. AC_ARG_PROGRAM autoconf docs:
transform=@program_transform_name@
@@ -133,23 +138,23 @@ geom.c: $(LIBCTL_DIR)/utils/geom.c
install: install-mpb @INSTALL_MPB_SPLIT@
install-mpb: $(PROGRAM_NAME)
- $(INSTALL) -d $(prefix)/bin
- $(INSTALL) -m 0755 -s .$(PROGRAM_NAME) $(prefix)/bin/`echo $(PROGRAM_NAME)|sed '$(transform)'`
- $(INSTALL) -d $(prefix)/share/libctl/specs
- $(INSTALL) -m 0644 $(SPECIFICATION_FILE) $(prefix)/share/libctl/specs
- $(INSTALL) -d $(mandir)/man1
- $(INSTALL) -m 0644 $(PROGRAM_NAME).1 $(mandir)/man1
+ $(INSTALL) -d $(DESTDIR)$(prefix)/bin
+ $(INSTALL_PROGRAM) .$(PROGRAM_NAME) $(DESTDIR)$(bindir)/`echo $(PROGRAM_NAME)|sed '$(transform)'`
+ $(INSTALL) -d $(DESTDIR)$(prefix)/share/libctl/specs
+ $(INSTALL_DATA) $(SPECIFICATION_FILE) $(DESTDIR)$(prefix)/share/libctl/specs
+ $(INSTALL) -d $(DESTDIR)$(mandir)/man1
+ $(INSTALL_DATA) $(PROGRAM_NAME).1 $(DESTDIR)$(mandir)/man1
mpb-split-tmp:
rm -f mpb-split-tmp
mpb_name=`echo mpb | sed '$(transform)'`; \
- sed "s%\./mpb%"$(prefix)/bin/"$$mpb_name%g" mpb-split > mpb-split-tmp;
+ sed "s%\./mpb%"$(bindir)/"$$mpb_name%g" mpb-split > mpb-split-tmp;
install-mpb-split: mpb-split-tmp
mpb_name=`echo mpb | sed '$(transform)'`; \
- $(INSTALL) -m 0755 mpb-split-tmp $(prefix)/bin/$${mpb_name}-split
- $(INSTALL) -d $(mandir)/man1
- $(INSTALL) -m 0644 mpb-split.1 $(mandir)/man1
+ $(INSTALL_SCRIPT) mpb-split-tmp $(DESTDIR)$(bindir)/$${mpb_name}-split
+ $(INSTALL) -d $(DESTDIR)$(mandir)/man1
+ $(INSTALL_DATA) mpb-split.1 $(DESTDIR)$(mandir)/man1
clean:
rm -f $(ALL_OBJECTS) ctl-io.c ctl-io.h main.c geom.c \

13
mpb-openmpi/patches/patch-src_util_Makefile.in Normal file
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$NetBSD: patch-src_util_Makefile.in,v 1.1 2013/06/23 18:33:44 outpaddling Exp $
--- src/util/Makefile.in.orig 2002-09-14 22:20:55.000000000 +0000
+++ src/util/Makefile.in
@@ -15,7 +15,7 @@ AR = ar
all: libs
-OBJECTS = debug_malloc.o mpi_utils.o
+OBJECTS = debug_malloc.o mpi_utils.o check.o
LIBNAME = util.a
libs: $(LIBNAME)

20
mpb-openmpi/patches/patch-src_util_check.c Normal file
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$NetBSD: patch-src_util_check.c,v 1.1 2013/06/23 18:33:44 outpaddling Exp $
--- src/util/check.c.orig 2013-04-03 21:01:44.000000000 +0000
+++ src/util/check.c
@@ -0,0 +1,15 @@
+#include <libguile.h>
+
+void
+scm_mpb_error (const char *file, int line, const char *message)
+{
+ char buf[256];
+ sprintf (buf, "%s, line %d", file, line);
+ scm_error(
+ scm_string_to_symbol (scm_makfrom0str("mpb-error")),
+ buf,
+ message,
+ SCM_BOOL_F, /* no args */
+ SCM_BOOL_F /* no rest */
+ );
+}

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mpb-openmpi/patches/patch-src_util_check.h Normal file
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$NetBSD: patch-src_util_check.h,v 1.1 2013/06/23 18:33:44 outpaddling Exp $
--- src/util/check.h.orig 2013-04-03 21:02:05.000000000 +0000
+++ src/util/check.h
@@ -33,6 +33,7 @@ extern void check_breakpoint(void);
#define CHECK_BREAKPOINT /* nothing */
#endif
+#ifdef HAVE_MPI
#define CHECK(condition, message) do { \
if (!(condition)) { \
CHECK_BREAKPOINT; \
@@ -40,6 +41,14 @@ extern void check_breakpoint(void);
message "\n", __LINE__); \
} \
} while (0)
+#else
+extern void scm_mpb_error (const char *file, int line, const char *message);
+#define CHECK(condition, message) \
+ if (!(condition)) { \
+ CHECK_BREAKPOINT; \
+ scm_mpb_error(__FILE__, __LINE__, message); \
+ }
+#endif
#endif /* not CHECK_DISABLE */

32
mpb-openmpi/patches/patch-utils_Makefile.in Normal file
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$NetBSD: patch-utils_Makefile.in,v 1.1 2013/06/23 18:33:44 outpaddling Exp $
--- utils/Makefile.in.orig 2002-09-14 22:20:55.000000000 +0000
+++ utils/Makefile.in
@@ -12,7 +12,12 @@ RANLIB = @RANLIB@
@SET_MAKE@
INSTALL = @INSTALL@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
+INSTALL_DATA = @INSTALL_DATA@
prefix = @prefix@
+exec_prefix = @exec_prefix@
+bindir = @bindir@
mandir = @mandir@
# c.f. AC_ARG_PROGRAM autoconf docs:
transform=@program_transform_name@
@@ -35,10 +40,10 @@ install: install-@BUILD_MPB_DATA@
install-: # dummy target for when BUILD_MPB_DATA is ""
install-mpb-data: mpb-data
- $(INSTALL) -d $(prefix)/bin
- $(INSTALL) -m 0755 -s mpb-data $(prefix)/bin/`echo mpb-data|sed '$(transform)'`
- $(INSTALL) -d $(mandir)/man1
- $(INSTALL) -m 0644 mpb-data.1 $(mandir)/man1
+ $(INSTALL) -d $(DESTDIR)$(bindir)
+ $(INSTALL_PROGRAM) mpb-data $(DESTDIR)$(bindir)/`echo mpb-data|sed '$(transform)'`
+ $(INSTALL) -d $(DESTDIR)$(mandir)/man1
+ $(INSTALL_DATA) mpb-data.1 $(DESTDIR)$(mandir)/man1
clean:
rm -f mpb-data mpb-data.o core