124 lines
3.5 KiB
Plaintext
124 lines
3.5 KiB
Plaintext
@comment $NetBSD$
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bin/anno
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bin/bgzip
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bin/chaps
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bin/epacts
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bin/epacts-anno
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bin/epacts-cat
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bin/epacts-cis-extract
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bin/epacts-download
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bin/epacts-enrich
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bin/epacts-group
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bin/epacts-make-group
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bin/epacts-make-kin
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bin/epacts-multi
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bin/epacts-pca-plot
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bin/epacts-plot
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bin/epacts-single
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bin/epacts-zoom
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bin/epacts.pm
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bin/epstopdf
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bin/pEmmax
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bin/tabix
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bin/test_run_epacts.sh
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bin/vcfast
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bin/wGetOptions.pm
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lib/epactsR/DESCRIPTION
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lib/epactsR/Meta/Rd.rds
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lib/epactsR/Meta/hsearch.rds
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lib/epactsR/Meta/links.rds
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lib/epactsR/Meta/nsInfo.rds
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lib/epactsR/Meta/package.rds
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lib/epactsR/NAMESPACE
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lib/epactsR/help/AnIndex
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lib/epactsR/help/aliases.rds
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lib/epactsR/help/epactsR.rdb
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lib/epactsR/help/epactsR.rdx
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lib/epactsR/help/paths.rds
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lib/epactsR/html/00Index.html
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lib/epactsR/html/R.css
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lib/epactsR/libs/epactsR.so
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lib/mmSKAT/DESCRIPTION
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lib/mmSKAT/Meta/Rd.rds
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lib/mmSKAT/Meta/data.rds
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lib/mmSKAT/Meta/hsearch.rds
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lib/mmSKAT/Meta/links.rds
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lib/mmSKAT/Meta/nsInfo.rds
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lib/mmSKAT/Meta/package.rds
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lib/mmSKAT/NAMESPACE
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lib/mmSKAT/R/mmSKAT
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lib/mmSKAT/R/mmSKAT.rdb
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lib/mmSKAT/R/mmSKAT.rdx
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lib/mmSKAT/data/SKAT.example.rda
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lib/mmSKAT/data/SKAT.haplotypes.rda
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lib/mmSKAT/data/datalist
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lib/mmSKAT/help/AnIndex
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lib/mmSKAT/help/aliases.rds
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lib/mmSKAT/help/mmSKAT.rdb
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lib/mmSKAT/help/mmSKAT.rdx
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lib/mmSKAT/help/paths.rds
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lib/mmSKAT/html/00Index.html
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lib/mmSKAT/html/R.css
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lib/mmSKAT/libs/mmSKAT.so
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share/EPACTS/1000G_dummy_pheno.ped
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share/EPACTS/1000G_exome_chr20_example_softFiltered.calls.vcf.gz
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share/EPACTS/1000G_exome_chr20_example_softFiltered.calls.vcf.gz.tbi
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share/EPACTS/GillSansItalic.pfb
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share/EPACTS/GillSansMT.pfb
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share/EPACTS/arial.pfb
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share/EPACTS/calibri.pfb
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share/EPACTS/codon.txt
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share/EPACTS/epactsGroup.R
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share/EPACTS/epactsMulti.R
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share/EPACTS/epactsR_3.3.2.tar.gz
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share/EPACTS/epactsSingle.R
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share/EPACTS/genetic_map_GRCh37_wgs.txt.gz
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share/EPACTS/genetic_map_GRCh37_wgs.txt.gz.tbi
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share/EPACTS/group.b.burden.R
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share/EPACTS/group.b.collapse.R
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share/EPACTS/group.b.madsen.R
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share/EPACTS/group.b.wcnt.R
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share/EPACTS/group.mmskat.R
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share/EPACTS/group.q.reverse.R
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share/EPACTS/group.q.wilcox.R
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share/EPACTS/group.skat.R
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share/EPACTS/hg19_gencodeV14.txt.gz
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share/EPACTS/hg19_gencodeV7.txt.gz
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share/EPACTS/hg19_refFlat.txt.gz
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share/EPACTS/hg19_refGene.txt.gz
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share/EPACTS/mmSKAT_0.95.tar.gz
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share/EPACTS/multi.q.linear.R
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share/EPACTS/priority.txt
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share/EPACTS/prologue.ps
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share/EPACTS/single.b.firth.R
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share/EPACTS/single.b.firthCov.R
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share/EPACTS/single.b.lrt.R
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share/EPACTS/single.b.score.R
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share/EPACTS/single.b.sna0.R
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share/EPACTS/single.b.sna2.R
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share/EPACTS/single.b.spa2.R
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share/EPACTS/single.b.wald.R
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share/EPACTS/single.q.emmaxR.R
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share/EPACTS/single.q.linear.R
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share/EPACTS/single.q.lm.R
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share/EPACTS/single.q.reverse.R
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share/EPACTS/single.q.wilcox.R
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share/EPACTS/wgEncodeBroadHmmGm12878HMM.bed.gz
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share/EPACTS/wgEncodeBroadHmmGm12878HMM.bed.gz.tbi
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share/EPACTS/wgEncodeBroadHmmH1hescHMM.bed.gz
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share/EPACTS/wgEncodeBroadHmmH1hescHMM.bed.gz.tbi
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share/EPACTS/wgEncodeBroadHmmHepg2HMM.bed.gz
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share/EPACTS/wgEncodeBroadHmmHepg2HMM.bed.gz.tbi
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share/EPACTS/wgEncodeBroadHmmHmecHMM.bed.gz
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share/EPACTS/wgEncodeBroadHmmHmecHMM.bed.gz.tbi
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share/EPACTS/wgEncodeBroadHmmHsmmHMM.bed.gz
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share/EPACTS/wgEncodeBroadHmmHsmmHMM.bed.gz.tbi
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share/EPACTS/wgEncodeBroadHmmHuvecHMM.bed.gz
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share/EPACTS/wgEncodeBroadHmmHuvecHMM.bed.gz.tbi
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share/EPACTS/wgEncodeBroadHmmK562HMM.bed.gz
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share/EPACTS/wgEncodeBroadHmmK562HMM.bed.gz.tbi
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share/EPACTS/wgEncodeBroadHmmNhekHMM.bed.gz
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share/EPACTS/wgEncodeBroadHmmNhekHMM.bed.gz.tbi
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share/EPACTS/wgEncodeBroadHmmNhlfHMM.bed.gz
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share/EPACTS/wgEncodeBroadHmmNhlfHMM.bed.gz.tbi
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