78 lines
2.3 KiB
Makefile
78 lines
2.3 KiB
Makefile
# $NetBSD$
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#
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###########################################################
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# Generated by fbsd2pkg #
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# Tue Jul 31 09:11:25 CDT 2018 #
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###########################################################
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###########################################################
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# Unconverted and partially converted FreeBSD port syntax:
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## $FreeBSD$
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# LIB_DEPENDS= libboost_iostreams.so:devel/boost-libs
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# RUN_DEPENDS= uchime>=0:wip/uchime
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# Unknown tool: USE_TOOLS= readline
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##MAKEFILE= makefile
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#PLIST_FILES= bin/mothur
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DISTNAME= mothur-${PORTVERSION}
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CATEGORIES= wip
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MASTER_SITES= ${MASTER_SITE_GITHUB:=mothur/}
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GITHUB_PROJECT= mothur
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GITHUB_TAG= v${PORTVERSION}
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MAINTAINER= dsiercks@uwm.edu
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HOMEPAGE= https://www.mothur.org/
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COMMENT= Bioinformatics tool for the microbial ecology community
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# Check this
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LICENSE= gnu-gpl-v3
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# Test and change if necessary.
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# MAKE_JOBS_SAFE= no
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# Just assuming C and C++: Adjust this!
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USE_LANGUAGES= c c++
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USE_TOOLS+= gmake
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BUILD_TARGET= mothur
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PORTVERSION= 1.40.5
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DATADIR= ${PREFIX}/share/mothur
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DOCSDIR= ${PREFIX}/share/doc/mothur
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EXAMPLESDIR= ${PREFIX}/share/examples/mothur
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DEPENDS+= vsearch>=0:../../wip/vsearch
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SUBST_CLASSES+= thread1
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SUBST_STAGE.thread1= post-patch
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SUBST_SED.thread1= -e "s|thread[*]|std::thread*|g"
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SUBST_FILES.thread1= ${WRKSRC}/source/*.cpp
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SUBST_FILES.thread1+= ${WRKSRC}/source/*/*.cpp
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SUBST_CLASSES+= thread2
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SUBST_STAGE.thread2= post-patch
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SUBST_SED.thread2= -e "s|new thread(|new std::thread(|g"
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SUBST_FILES.thread2= ${WRKSRC}/source/*.cpp
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SUBST_FILES.thread2+= ${WRKSRC}/source/*/*.cpp
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# Sets OPSYS, OS_VERSION, MACHINE_ARCH, etc..
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# .include "../../mk/bsd.prefs.mk"
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# Keep this if there are user-selectable options.
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# .include "options.mk"
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# Specify which directories to create before install.
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# You should only need this if using your own install target.
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INSTALLATION_DIRS= bin include lib ${PKGMANDIR}/man1 share/doc share/examples
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# Guess based on USES=
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.include "../../devel/ncurses/buildlink3.mk"
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.include "../../devel/boost-libs/buildlink3.mk"
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.include "../../devel/readline/buildlink3.mk"
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# Convert any _DEPENDS above that have a buildlink3.mk
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# .include "../..///buildlink3.mk"
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# Linux doesn't have zlib in the base, so just in case...
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.include "../../devel/zlib/buildlink3.mk"
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.include "../../mk/bsd.pkg.mk"
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