43 lines
1.6 KiB
Makefile
43 lines
1.6 KiB
Makefile
# $NetBSD: Makefile,v 1.9 2012/09/29 00:15:13 asau Exp $
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#
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DISTNAME= GlimmerM-2.5.1
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CATEGORIES= biology
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MASTER_SITES= ftp://ftp.tigr.org/pub/software/GlimmerM/
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MAINTAINER= hdp@cs.nmsu.edu
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HOMEPAGE= http://www.tigr.org/software/glimmerm/
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COMMENT= Gene finder developed specifically for eukaryotes
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MAKE_FILE= makefile
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USE_TOOLS+= gmake
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WRKSRC= ${WRKDIR}/GlimmerM
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BUILD_DIRS= sources train
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USE_LANGUAGES= c++
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INSTALLATION_DIRS= bin
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do-install:
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${INSTALL_PROGRAM} ${WRKSRC}/sources/glimmerm ${DESTDIR}${PREFIX}/bin
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${INSTALL_DATA_DIR} ${DESTDIR}${PREFIX}/share/glimmerm
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${INSTALL_DATA} ${WRKSRC}/train/readme.train ${DESTDIR}${PREFIX}/share/glimmerm
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${INSTALL_SCRIPT} ${WRKSRC}/train/trainGlimmerM ${DESTDIR}${PREFIX}/share/glimmerm
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.for f in mktree build1 falsecomp findsites karlin score scoreATG \
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scoreSTOP updomeasure build-imm build-icm dtscore
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${INSTALL_PROGRAM} ${WRKSRC}/train/${f:Q} ${DESTDIR}${PREFIX}/share/glimmerm
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.endfor
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${INSTALL_SCRIPT} ${WRKSRC}/train/orf.pm ${DESTDIR}${PREFIX}/share/glimmerm
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${INSTALL_SCRIPT} ${WRKSRC}/train/formtrain.pm ${DESTDIR}${PREFIX}/share/glimmerm
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${INSTALL_SCRIPT} ${WRKSRC}/train/filter.pm ${DESTDIR}${PREFIX}/share/glimmerm
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${INSTALL_SCRIPT} ${WRKSRC}/train/dectree.pm ${DESTDIR}${PREFIX}/share/glimmerm
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${INSTALL_SCRIPT} ${WRKSRC}/train/dectree.no_oblique.pm ${DESTDIR}${PREFIX}/share/glimmerm
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${INSTALL_DATA_DIR} ${DESTDIR}${PREFIX}/share/doc/glimmerm
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${INSTALL_DATA} ${WRKSRC}/README.first ${DESTDIR}${PREFIX}/share/doc/glimmerm
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${INSTALL_DATA_DIR} ${DESTDIR}${PREFIX}/share/examples/glimmerm
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${CP} -r ${WRKSRC}/trained_dir ${DESTDIR}${PREFIX}/share/examples/glimmerm
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.include "../../mk/bsd.pkg.mk"
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