11 lines
527 B
Plaintext
11 lines
527 B
Plaintext
Wise2 is a package focused on comparisons of bio polymers, commonly DNA
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sequence and protein sequence. Wise2's particular forte is the
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comparison of DNA sequence at the level of its protein translation. This
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comparison allows the simultaneous prediction of say gene structure with
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homology based alignment.
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Wise2 also contains other algorithms, such as the venerable
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Smith-Waterman algorithm, or more modern ones such as Stephen Altschul's
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generalised gap penalties, or even experimental ones developed in house,
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such as dba.
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