51 lines
1.4 KiB
Makefile
51 lines
1.4 KiB
Makefile
# $NetBSD$
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#
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###########################################################
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# Generated by fbsd2pkg #
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# Wed Mar 2 08:06:07 CST 2016 #
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###########################################################
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DISTNAME= bowtie2-${PV}
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CATEGORIES= biology
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MASTER_SITES= ${MASTER_SITE_GITHUB:=BenLangmead/}
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GITHUB_PROJECT= bowtie2
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GITHUB_TAG= v${PV}
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MAINTAINER= bacon@NetBSD.org
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HOMEPAGE= http://bowtie-bio.sourceforge.net/index.shtml
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COMMENT= Ultrafast, memory-efficient short read aligner
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LICENSE= artistic
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USE_LANGUAGES= c c++
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USE_TOOLS+= gmake perl:run pax
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REPLACE_PERL= scripts/*.pl bowtie2
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REPLACE_PYTHON= bowtie2-build bowtie2-inspect
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PV= 2.3.4.2
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DATADIR= ${PREFIX}/share/bowtie2
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DOCSDIR= ${PREFIX}/share/doc/bowtie2
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EXAMPLESDIR= ${PREFIX}/share/examples/bowtie2
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INSTALLATION_DIRS= share/bowtie2/scripts
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post-install:
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${INSTALL_PROGRAM} \
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${WRKSRC}/bowtie2*-s \
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${WRKSRC}/bowtie2*-l \
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${DESTDIR}${PREFIX}/bin
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${INSTALL_SCRIPT} \
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${WRKSRC}/scripts/*.sh \
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${WRKSRC}/scripts/*.pl \
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${DESTDIR}${DATADIR}/scripts
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${INSTALL_SCRIPT} \
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${FILESDIR}/bowtie2-manual \
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${DESTDIR}${PREFIX}/bin
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cd ${WRKSRC}/example && pax -rw index reads reference \
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${DESTDIR}${EXAMPLESDIR}
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cd ${WRKSRC}/doc && pax -rw * ${DESTDIR}${DOCSDIR}
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.include "../../lang/python/application.mk"
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.include "../../wip/tbb/buildlink3.mk"
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.include "../../devel/zlib/buildlink3.mk"
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.include "../../mk/bsd.pkg.mk"
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