51 lines
1.3 KiB
Makefile
51 lines
1.3 KiB
Makefile
# $NetBSD$
|
|
#
|
|
###########################################################
|
|
# Generated by fbsd2pkg #
|
|
# Mon Apr 29 11:01:43 CDT 2019 #
|
|
###########################################################
|
|
|
|
DISTNAME= GEMMA-0.98.1
|
|
PKGREVISION= 1
|
|
CATEGORIES= biology
|
|
MASTER_SITES= ${MASTER_SITE_GITHUB:=genetics-statistics/}
|
|
GITHUB_PROJECT= GEMMA
|
|
|
|
MAINTAINER= bacon@NetBSD.org
|
|
HOMEPAGE= https://github.com/genetics-statistics/GEMMA
|
|
COMMENT= Genome-wide Efficient Mixed Model Association
|
|
LICENSE= gnu-gpl-v3
|
|
|
|
USE_LANGUAGES= c c++
|
|
USE_TOOLS+= gmake perl
|
|
|
|
CXXFLAGS+= -I${PREFIX}/include/eigen3
|
|
CXXFLAGS+= -fpermissive
|
|
MAKE_FLAGS+= LDFLAGS+="${LAPACK_LIBS} -lgsl -lcblas -lz"
|
|
MAKE_FILE= ${FILESDIR}/Makefile
|
|
|
|
# Requires multithreading for decent performance
|
|
BLAS_ACCEPTED= openblas_pthread openblas_openmp
|
|
|
|
.include "../../wip/mk/blas.buildlink3.mk"
|
|
|
|
.if !empty(BLAS_TYPE:Mopenblas*)
|
|
CXXFLAGS+= -I${PREFIX}/include/${BLAS_TYPE} -DOPENBLAS
|
|
.endif
|
|
|
|
# No multithreading
|
|
.if ${BLAS_TYPE} == "openblas"
|
|
CXXFLAGS+= -DOPENBLAS_LEGACY
|
|
.endif
|
|
|
|
INSTALLATION_DIRS= bin share/examples
|
|
|
|
do-test:
|
|
(cd ${WRKSRC}/test && ${SH} test_suite.sh)
|
|
|
|
.include "../../devel/zlib/buildlink3.mk"
|
|
.include "../../wip/cblas/buildlink3.mk"
|
|
.include "../../math/gsl/buildlink3.mk"
|
|
.include "../../math/eigen3/buildlink3.mk"
|
|
.include "../../mk/bsd.pkg.mk"
|