2017-08-28 23:16:49 +00:00
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# $NetBSD$
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#
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###########################################################
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# Generated by fbsd2pkg #
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# Mon Aug 28 18:05:44 CDT 2017 #
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###########################################################
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DISTNAME= plink-${PORTVERSION}
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2017-09-20 22:03:07 +00:00
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PKGNAME= plink19-${PORTVERSION}
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2017-08-29 17:24:22 +00:00
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CATEGORIES= biology
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2017-08-28 23:16:49 +00:00
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MASTER_SITES= ${MASTER_SITE_GITHUB:=chrchang/}
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GITHUB_PROJECT= plink-ng
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GITHUB_TAG= cbcf442c176036138419b14d6b46a3d57e8325d4
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2018-01-02 23:45:38 +00:00
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MAINTAINER= bacon@NetBSD.org
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2017-09-03 09:25:39 +00:00
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#HOMEPAGE= http://pngu.mgh.harvard.edu/~purcell/plink/
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2017-08-28 23:16:49 +00:00
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COMMENT= Whole genome association analysis toolset
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LICENSE= gnu-gpl-v2
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2018-01-27 23:17:02 +00:00
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BUILDLINK_API_DEPENDS.zlib+= zlib>=1.2.4
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2017-09-01 21:22:40 +00:00
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2017-08-28 23:16:49 +00:00
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# We need Fortran LDFLAGS to link with Lapack.
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USE_LANGUAGES= c c++ fortran
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USE_TOOLS+= gmake
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WRKSRC= ${WRKDIR}/plink-ng-${GITHUB_TAG}/1.9
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2017-08-29 17:24:22 +00:00
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CFLAGS+= -DDYNAMIC_ZLIB -I${PREFIX}/include -I.
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2017-08-28 23:16:49 +00:00
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CXXFLAGS+= -DDYNAMIC_ZLIB -I${PREFIX}/include
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2017-08-29 17:24:22 +00:00
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MAKE_FLAGS+= ZLIB=-lz BLASFLAGS="-L${PREFIX}/lib -llapack -lcblas -lblas -lpthread"
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2017-08-28 23:16:49 +00:00
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INSTALL_TARGET= install-strip
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PORTVERSION= 1.90b4
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INSTALLATION_DIRS= bin
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post-patch:
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${CP} ${WRKSRC}/Makefile.std ${WRKSRC}/Makefile
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2017-08-29 17:24:22 +00:00
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# Override install target and install as plink19 to allow coexistence with
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2017-08-28 23:16:49 +00:00
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# plink 1.07
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do-install:
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${INSTALL_PROGRAM} ${WRKSRC}/plink ${DESTDIR}${PREFIX}/bin/plink19
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2017-08-29 17:24:22 +00:00
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.include "../../wip/cblas/buildlink3.mk"
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2017-08-28 23:16:49 +00:00
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.include "../../math/blas/buildlink3.mk"
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.include "../../math/lapack/buildlink3.mk"
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.include "../../devel/zlib/buildlink3.mk"
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2017-08-29 17:24:22 +00:00
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.include "../../mk/pthread.buildlink3.mk"
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2017-08-28 23:16:49 +00:00
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.include "../../mk/bsd.pkg.mk"
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