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ddocent, py-anvio, trinity: Use wip/samtools dep until fixed

This commit is contained in:
Jason Bacon 2019-02-15 16:23:20 -06:00
parent c937d85e78
commit 411d8f799d
3 changed files with 3 additions and 3 deletions
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2
ddocent/Makefile
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@ -27,7 +27,7 @@ DEPENDS= mawk>=0:../../lang/mawk \
parallel>=0:../../parallel/parallel \
bwa>=0.7.13:../../biology/bwa \
cdhit>=0:../../biology/cdhit \
samtools>=1.3:../../biology/samtools \
samtools>=1.3:../../wip/samtools \
vcftools>=0.1.15:../../wip/vcftools \
Trimmomatic>=0:../../wip/trimmomatic \
stacks>=0:../../wip/stacks \

2
py-anvio/Makefile
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@ -23,7 +23,7 @@ HOMEPAGE= http://merenlab.org/software/anvio/
COMMENT= Analysis and visualization platform for 'omics data
LICENSE= gnu-gpl-v3
DEPENDS= samtools>0:../../biology/samtools \
DEPENDS= samtools>0:../../wip/samtools \
hmmer>0:../../wip/hmmer \
FastTree>0:../../wip/fasttree \
muscle>0:../../wip/muscle \

2
trinity/Makefile
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@ -23,7 +23,7 @@ DEPENDS+= slclust>=0.0.0.20100202:../../wip/slclust
DEPENDS+= salmon>=0.11.3:../../wip/salmon
DEPENDS+= bowtie>=1.1.2:../../wip/bowtie
DEPENDS+= bowtie2>=2.3.4.2:../../wip/bowtie2
DEPENDS+= samtools>=1.9:../../biology/samtools
DEPENDS+= samtools>=1.9:../../wip/samtools
DEPENDS+= jellyfish>=2.2.10:../../wip/jellyfish2
DEPENDS+= parafly>=2013.01.21:../../wip/parafly
DEPENDS+= fastool>=0.1.4:../../wip/fastool