ddocent, py-anvio, trinity: Use wip/samtools dep until fixed
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@ -27,7 +27,7 @@ DEPENDS= mawk>=0:../../lang/mawk \
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parallel>=0:../../parallel/parallel \
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parallel>=0:../../parallel/parallel \
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bwa>=0.7.13:../../biology/bwa \
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bwa>=0.7.13:../../biology/bwa \
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cdhit>=0:../../biology/cdhit \
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cdhit>=0:../../biology/cdhit \
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samtools>=1.3:../../biology/samtools \
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samtools>=1.3:../../wip/samtools \
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vcftools>=0.1.15:../../wip/vcftools \
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vcftools>=0.1.15:../../wip/vcftools \
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Trimmomatic>=0:../../wip/trimmomatic \
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Trimmomatic>=0:../../wip/trimmomatic \
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stacks>=0:../../wip/stacks \
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stacks>=0:../../wip/stacks \
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@ -23,7 +23,7 @@ HOMEPAGE= http://merenlab.org/software/anvio/
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COMMENT= Analysis and visualization platform for 'omics data
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COMMENT= Analysis and visualization platform for 'omics data
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LICENSE= gnu-gpl-v3
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LICENSE= gnu-gpl-v3
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DEPENDS= samtools>0:../../biology/samtools \
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DEPENDS= samtools>0:../../wip/samtools \
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hmmer>0:../../wip/hmmer \
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hmmer>0:../../wip/hmmer \
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FastTree>0:../../wip/fasttree \
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FastTree>0:../../wip/fasttree \
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muscle>0:../../wip/muscle \
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muscle>0:../../wip/muscle \
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@ -23,7 +23,7 @@ DEPENDS+= slclust>=0.0.0.20100202:../../wip/slclust
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DEPENDS+= salmon>=0.11.3:../../wip/salmon
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DEPENDS+= salmon>=0.11.3:../../wip/salmon
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DEPENDS+= bowtie>=1.1.2:../../wip/bowtie
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DEPENDS+= bowtie>=1.1.2:../../wip/bowtie
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DEPENDS+= bowtie2>=2.3.4.2:../../wip/bowtie2
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DEPENDS+= bowtie2>=2.3.4.2:../../wip/bowtie2
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DEPENDS+= samtools>=1.9:../../biology/samtools
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DEPENDS+= samtools>=1.9:../../wip/samtools
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DEPENDS+= jellyfish>=2.2.10:../../wip/jellyfish2
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DEPENDS+= jellyfish>=2.2.10:../../wip/jellyfish2
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DEPENDS+= parafly>=2013.01.21:../../wip/parafly
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DEPENDS+= parafly>=2013.01.21:../../wip/parafly
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DEPENDS+= fastool>=0.1.4:../../wip/fastool
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DEPENDS+= fastool>=0.1.4:../../wip/fastool
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