2017-08-28 23:16:49 +00:00
|
|
|
# $NetBSD$
|
|
|
|
|
#
|
|
|
|
|
###########################################################
|
|
|
|
|
# Generated by fbsd2pkg #
|
|
|
|
|
# Mon Aug 28 18:05:44 CDT 2017 #
|
|
|
|
|
###########################################################
|
|
|
|
|
|
|
|
|
|
DISTNAME= plink-${PORTVERSION}
|
2020-10-12 22:07:16 +00:00
|
|
|
PKGREVISION= 1
|
2017-08-29 17:24:22 +00:00
|
|
|
CATEGORIES= biology
|
2017-08-28 23:16:49 +00:00
|
|
|
MASTER_SITES= ${MASTER_SITE_GITHUB:=chrchang/}
|
|
|
|
|
GITHUB_PROJECT= plink-ng
|
2019-02-11 15:10:34 +00:00
|
|
|
GITHUB_TAG= 00aaeb53d3edd569c93bd60e7bcd27ced4cd8fdb
|
2017-08-28 23:16:49 +00:00
|
|
|
|
2018-01-02 23:45:38 +00:00
|
|
|
MAINTAINER= bacon@NetBSD.org
|
2017-09-03 09:25:39 +00:00
|
|
|
#HOMEPAGE= http://pngu.mgh.harvard.edu/~purcell/plink/
|
2017-08-28 23:16:49 +00:00
|
|
|
COMMENT= Whole genome association analysis toolset
|
|
|
|
|
LICENSE= gnu-gpl-v2
|
|
|
|
|
|
2018-01-27 23:17:02 +00:00
|
|
|
BUILDLINK_API_DEPENDS.zlib+= zlib>=1.2.4
|
2017-09-01 21:22:40 +00:00
|
|
|
|
2017-08-28 23:16:49 +00:00
|
|
|
# We need Fortran LDFLAGS to link with Lapack.
|
|
|
|
|
USE_LANGUAGES= c c++ fortran
|
|
|
|
|
USE_TOOLS+= gmake
|
|
|
|
|
|
|
|
|
|
WRKSRC= ${WRKDIR}/plink-ng-${GITHUB_TAG}/1.9
|
|
|
|
|
|
2017-08-29 17:24:22 +00:00
|
|
|
CFLAGS+= -DDYNAMIC_ZLIB -I${PREFIX}/include -I.
|
2017-08-28 23:16:49 +00:00
|
|
|
CXXFLAGS+= -DDYNAMIC_ZLIB -I${PREFIX}/include
|
2019-07-26 22:50:04 +00:00
|
|
|
MAKE_FLAGS+= ZLIB=-lz BLASFLAGS="-L${PREFIX}/lib ${LAPACK_LIBS} ${BLAS_LIBS} -lcblas -lpthread"
|
2017-08-28 23:16:49 +00:00
|
|
|
INSTALL_TARGET= install-strip
|
|
|
|
|
|
|
|
|
|
PORTVERSION= 1.90b4
|
2019-07-27 00:21:27 +00:00
|
|
|
BLAS_ACCEPTED= openblas_pthread
|
2017-08-28 23:16:49 +00:00
|
|
|
|
|
|
|
|
INSTALLATION_DIRS= bin
|
|
|
|
|
|
|
|
|
|
post-patch:
|
|
|
|
|
${CP} ${WRKSRC}/Makefile.std ${WRKSRC}/Makefile
|
|
|
|
|
|
|
|
|
|
do-install:
|
2019-02-10 23:00:10 +00:00
|
|
|
${INSTALL_PROGRAM} ${WRKSRC}/plink ${DESTDIR}${PREFIX}/bin
|
2017-08-28 23:16:49 +00:00
|
|
|
|
2019-05-01 17:18:53 +00:00
|
|
|
.include "../../wip/mk/blas.buildlink3.mk"
|
2019-07-27 00:21:27 +00:00
|
|
|
.include "../../wip/cblas/buildlink3.mk"
|
2017-08-28 23:16:49 +00:00
|
|
|
.include "../../devel/zlib/buildlink3.mk"
|
2017-08-29 17:24:22 +00:00
|
|
|
.include "../../mk/pthread.buildlink3.mk"
|
2017-08-28 23:16:49 +00:00
|
|
|
.include "../../mk/bsd.pkg.mk"
|
